KGX STORAGE

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{
  "@id": "https://stars.renci.org/var/translator/releases/diseases/2025_12_09/",
  "@type": "sc:Dataset",
  "name": "diseases",
  "description": "A knowledge graph built for the NCATS Biomedical Data Translator project using Translator-Ingests, Biolink Model, and Node Normalizer.",
  "license": "MIT",
  "url": "https://stars.renci.org/var/translator/releases/diseases/2025_12_09/",
  "version": "2025_12_09",
  "dateCreated": "2025_12_09",
  "biolinkVersion": "4.3.5",
  "babelVersion": "2025sep1",
  "distribution": [
    {
      "@id": "diseases.tar.xz",
      "@type": "cr:FileObject",
      "contentUrl": "diseases.tar.xz",
      "encodingFormat": "application/x-xz",
      "description": "Compressed tar archive containing the KGX files: nodes.jsonl and edges.jsonl"
    }
  ],
  "isBasedOn": [
    {
      "id": "diseases",
      "name": "Jensen Lab DISEASES Database Reference Ingest Guide",
      "description": "The DISEASES database is a web resource that integrates knowledge on gene-disease associations. It generates de novo associations through automated text mining, and aggregates associations from external sources of manually curated knowledge and GWAS-based study results. The associations are assigned a confidence score to facilitate comparisons across data types and sources.",
      "license": {
        "license_name": "CC BY 4.0"
      },
      "url": [
        "https://diseases.jensenlab.org/Downloads"
      ],
      "version": "2025_12_07"
    }
  ],
  "schema": {
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      {
        "category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "count": 7318,
        "id_prefixes": {
          "NCBIGene": 7318
        },
        "attributes": {
          "name": 7318,
          "equivalent_identifiers": 7318,
          "information_content": 6696
        }
      },
      {
        "category": [
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        ],
        "count": 5568,
        "id_prefixes": {
          "MONDO": 5467,
          "DOID": 101
        },
        "attributes": {
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          "equivalent_identifiers": 5568,
          "information_content": 5495
        }
      },
      {
        "category": [
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        ],
        "count": 9139,
        "id_prefixes": {
          "UniProtKB": 9102,
          "ENSEMBL": 37
        },
        "attributes": {
          "name": 9139,
          "equivalent_identifiers": 9139,
          "information_content": 8969
        }
      }
    ],
    "nodes_summary": {
      "total_count": 22025,
      "id_prefixes": {
        "UniProtKB": 9102,
        "NCBIGene": 7318,
        "MONDO": 5467,
        "DOID": 101,
        "ENSEMBL": 37
      },
      "attributes": {
        "name": 22025,
        "equivalent_identifiers": 22025,
        "information_content": 21160
      }
    },
    "edges": [
      {
        "subject_category": [
          "biolink:Gene",
          "biolink:Protein"
        ],
        "predicate": "biolink:occurs_together_in_literature_with",
        "object_category": [
          "biolink:Disease"
        ],
        "count": 115034,
        "primary_knowledge_sources": {
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        },
        "qualifiers": {},
        "attributes": {
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          "original_subject": 115034,
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      {
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        "predicate": "biolink:occurs_together_in_literature_with",
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        "primary_knowledge_sources": {
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        },
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        "attributes": {
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        "object_id_prefixes": {
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          "DOID": 1682
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      },
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        ],
        "predicate": "biolink:associated_with",
        "object_category": [
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        "count": 2351,
        "primary_knowledge_sources": {
          "infores:medlineplus": 2290,
          "infores:amyco": 61
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        "qualifiers": {},
        "attributes": {
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        },
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        "object_category": [
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        "count": 1581,
        "primary_knowledge_sources": {
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        "attributes": {
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        "object_id_prefixes": {
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    ],
    "edges_summary": {
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      "predicates": {
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  }
}