{
"@id": "https://stars.renci.org/var/translator/releases/tmkp/2026_01_03/",
"@type": "sc:Dataset",
"name": "tmkp",
"description": "A knowledge graph built for the NCATS Biomedical Data Translator project using Translator-Ingests, Biolink Model, and Node Normalizer.",
"license": "MIT",
"url": "https://stars.renci.org/var/translator/releases/tmkp/2026_01_03/",
"version": "tmkp_tmkp-2023-03-05_1.0_2025sep1_4.3.6",
"dateCreated": "2026_01_03",
"biolinkVersion": "4.3.6",
"babelVersion": "2025sep1",
"distribution": [
{
"@id": "tmkp.tar.xz",
"@type": "cr:FileObject",
"contentUrl": "tmkp.tar.xz",
"encodingFormat": "application/x-xz",
"description": "Compressed tar archive containing the KGX files: nodes.jsonl and edges.jsonl"
}
],
"isBasedOn": [
{
"id": "tmkp",
"name": "Text Mining Knowledge Provider (TMKP)",
"description": "The Text Mining Knowledge Provider (TMKP) is a Translator knowledge provider that extracts\nbiomedical assertions from scientific literature using advanced text mining techniques.\nIt processes PubMed abstracts and full-text articles to identify relationships between\nbiological entities such as chemicals, genes, diseases, and phenotypes. The system uses\nnatural language processing and machine learning approaches to extract high-confidence\nassertions about how these entities interact.\n",
"license": {
"terms_of_use_url": null,
"terms_of_use_description": "Open access data provided through the Translator consortium"
},
"url": [
"https://storage.googleapis.com/translator-text-workflow-dev-public/"
],
"version": "tmkp-2023-03-05"
}
],
"schema": {
"nodes": [
{
"category": [
"biolink:Drug",
"biolink:SmallMolecule"
],
"count": 1896,
"id_prefixes": {
"CHEBI": 1722,
"UNII": 159,
"PUBCHEM.COMPOUND": 15
},
"attributes": {
"name": 1896,
"equivalent_identifiers": 1896,
"information_content": 1703
}
},
{
"category": [
"biolink:SmallMolecule"
],
"count": 4133,
"id_prefixes": {
"CHEBI": 2657,
"UNII": 1269,
"PUBCHEM.COMPOUND": 204,
"CHEMBL.COMPOUND": 3
},
"attributes": {
"name": 4133,
"equivalent_identifiers": 4133,
"information_content": 2656
}
},
{
"category": [
"biolink:MolecularMixture"
],
"count": 191,
"id_prefixes": {
"CHEBI": 104,
"UNII": 71,
"PUBCHEM.COMPOUND": 16
},
"attributes": {
"name": 191,
"equivalent_identifiers": 191,
"information_content": 102
}
},
{
"category": [
"biolink:ChemicalEntity"
],
"count": 990,
"id_prefixes": {
"DRUGBANK": 476,
"CHEBI": 376,
"UNII": 136,
"CHEMBL.COMPOUND": 2
},
"attributes": {
"name": 990,
"equivalent_identifiers": 990,
"information_content": 376
}
},
{
"category": [
"biolink:Drug"
],
"count": 490,
"id_prefixes": {
"DRUGBANK": 214,
"UNII": 137,
"CHEBI": 121,
"PUBCHEM.COMPOUND": 10,
"CHEMBL.COMPOUND": 4,
"MESH": 2,
"UMLS": 2
},
"attributes": {
"name": 490,
"equivalent_identifiers": 490,
"information_content": 124
}
},
{
"category": [
"biolink:MolecularMixture",
"biolink:SmallMolecule"
],
"count": 62,
"id_prefixes": {
"CHEBI": 54,
"UNII": 8
},
"attributes": {
"name": 62,
"equivalent_identifiers": 62,
"information_content": 55
}
},
{
"category": [
"biolink:ChemicalMixture"
],
"count": 43,
"id_prefixes": {
"CHEBI": 43
},
"attributes": {
"name": 43,
"equivalent_identifiers": 43,
"information_content": 43
}
},
{
"category": [
"biolink:ComplexMolecularMixture"
],
"count": 3,
"id_prefixes": {
"DRUGBANK": 3
},
"attributes": {
"name": 3,
"equivalent_identifiers": 3
}
},
{
"category": [
"biolink:PhenotypicFeature"
],
"count": 357,
"id_prefixes": {
"HP": 357
},
"attributes": {
"name": 357,
"equivalent_identifiers": 357,
"information_content": 357
}
},
{
"category": [
"biolink:Disease"
],
"count": 8415,
"id_prefixes": {
"MONDO": 8413,
"UMLS": 2
},
"attributes": {
"name": 8415,
"equivalent_identifiers": 8415,
"information_content": 8415
}
},
{
"category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 14631,
"id_prefixes": {
"NCBIGene": 14631
},
"attributes": {
"name": 14631,
"equivalent_identifiers": 14631,
"information_content": 14631
}
},
{
"category": [
"biolink:Protein"
],
"count": 1065,
"id_prefixes": {
"UMLS": 830,
"UniProtKB": 235
},
"attributes": {
"name": 1065,
"equivalent_identifiers": 1065,
"information_content": 235
}
}
],
"nodes_summary": {
"total_count": 32276,
"id_prefixes": {
"NCBIGene": 14631,
"MONDO": 8413,
"CHEBI": 5077,
"UNII": 1780,
"UMLS": 834,
"DRUGBANK": 693,
"HP": 357,
"PUBCHEM.COMPOUND": 245,
"UniProtKB": 235,
"CHEMBL.COMPOUND": 9,
"MESH": 2
},
"attributes": {
"name": 32276,
"equivalent_identifiers": 32276,
"information_content": 28697
}
},
"edges": [
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Disease"
],
"count": 386930,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 386930
},
"qualifiers": {},
"attributes": {
"id": 386930,
"category": 386930,
"knowledge_level": 386930,
"agent_type": 386930,
"has_supporting_studies": 386930,
"original_subject": 386930,
"original_object": 386930
},
"subject_id_prefixes": {
"NCBIGene": 386930
},
"object_id_prefixes": {
"MONDO": 386916,
"UMLS": 14
}
},
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 297742,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 297742
},
"qualifiers": {
"object_aspect_qualifier": 297742,
"object_direction_qualifier": 297742,
"qualified_predicate": 297742
},
"attributes": {
"id": 297742,
"category": 297742,
"knowledge_level": 297742,
"agent_type": 297742,
"has_supporting_studies": 297742,
"original_subject": 297742,
"original_object": 297742
},
"subject_id_prefixes": {
"NCBIGene": 297742
},
"object_id_prefixes": {
"NCBIGene": 297742
}
},
{
"subject_category": [
"biolink:Drug",
"biolink:SmallMolecule"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 287805,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 287805
},
"qualifiers": {
"object_aspect_qualifier": 287805,
"object_direction_qualifier": 287805,
"qualified_predicate": 287805
},
"attributes": {
"id": 287805,
"category": 287805,
"knowledge_level": 287805,
"agent_type": 287805,
"has_supporting_studies": 287805,
"original_subject": 287805,
"original_object": 287805
},
"subject_id_prefixes": {
"CHEBI": 277643,
"UNII": 5293,
"PUBCHEM.COMPOUND": 4869
},
"object_id_prefixes": {
"NCBIGene": 287805
}
},
{
"subject_category": [
"biolink:ChemicalEntity"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 57201,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 57201
},
"qualifiers": {
"object_aspect_qualifier": 57201,
"object_direction_qualifier": 57201,
"qualified_predicate": 57201
},
"attributes": {
"id": 57201,
"category": 57201,
"knowledge_level": 57201,
"agent_type": 57201,
"has_supporting_studies": 57201,
"original_subject": 57201,
"original_object": 57201
},
"subject_id_prefixes": {
"CHEBI": 30706,
"DRUGBANK": 21307,
"UNII": 5185,
"CHEMBL.COMPOUND": 3
},
"object_id_prefixes": {
"NCBIGene": 57201
}
},
{
"subject_category": [
"biolink:SmallMolecule"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 184395,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 184395
},
"qualifiers": {
"object_aspect_qualifier": 184395,
"object_direction_qualifier": 184395,
"qualified_predicate": 184395
},
"attributes": {
"id": 184395,
"category": 184395,
"knowledge_level": 184395,
"agent_type": 184395,
"has_supporting_studies": 184395,
"original_subject": 184395,
"original_object": 184395
},
"subject_id_prefixes": {
"CHEBI": 163275,
"UNII": 17182,
"PUBCHEM.COMPOUND": 3932,
"CHEMBL.COMPOUND": 6
},
"object_id_prefixes": {
"NCBIGene": 184395
}
},
{
"subject_category": [
"biolink:Drug",
"biolink:SmallMolecule"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Disease"
],
"count": 181017,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 181017
},
"qualifiers": {},
"attributes": {
"id": 181017,
"category": 181017,
"knowledge_level": 181017,
"agent_type": 181017,
"has_supporting_studies": 181017,
"original_subject": 181017,
"original_object": 181017
},
"subject_id_prefixes": {
"CHEBI": 173850,
"UNII": 5130,
"PUBCHEM.COMPOUND": 2037
},
"object_id_prefixes": {
"MONDO": 181006,
"UMLS": 11
}
},
{
"subject_category": [
"biolink:Drug",
"biolink:SmallMolecule"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Protein"
],
"count": 2304,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 2304
},
"qualifiers": {
"object_aspect_qualifier": 2304,
"object_direction_qualifier": 2304,
"qualified_predicate": 2304
},
"attributes": {
"id": 2304,
"category": 2304,
"knowledge_level": 2304,
"agent_type": 2304,
"has_supporting_studies": 2304,
"original_subject": 2304,
"original_object": 2304
},
"subject_id_prefixes": {
"CHEBI": 2216,
"UNII": 54,
"PUBCHEM.COMPOUND": 34
},
"object_id_prefixes": {
"UniProtKB": 2304
}
},
{
"subject_category": [
"biolink:SmallMolecule"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Disease"
],
"count": 25253,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 25253
},
"qualifiers": {},
"attributes": {
"id": 25253,
"category": 25253,
"knowledge_level": 25253,
"agent_type": 25253,
"has_supporting_studies": 25253,
"original_subject": 25253,
"original_object": 25253
},
"subject_id_prefixes": {
"CHEBI": 22970,
"UNII": 1936,
"PUBCHEM.COMPOUND": 343,
"CHEMBL.COMPOUND": 4
},
"object_id_prefixes": {
"MONDO": 25248,
"UMLS": 5
}
},
{
"subject_category": [
"biolink:ChemicalEntity"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Disease"
],
"count": 11193,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 11193
},
"qualifiers": {},
"attributes": {
"id": 11193,
"category": 11193,
"knowledge_level": 11193,
"agent_type": 11193,
"has_supporting_studies": 11193,
"original_subject": 11193,
"original_object": 11193
},
"subject_id_prefixes": {
"CHEBI": 6518,
"DRUGBANK": 3994,
"UNII": 681
},
"object_id_prefixes": {
"MONDO": 11192,
"UMLS": 1
}
},
{
"subject_category": [
"biolink:SmallMolecule"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Disease"
],
"count": 80631,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 80631
},
"qualifiers": {},
"attributes": {
"id": 80631,
"category": 80631,
"knowledge_level": 80631,
"agent_type": 80631,
"has_supporting_studies": 80631,
"original_subject": 80631,
"original_object": 80631
},
"subject_id_prefixes": {
"CHEBI": 65927,
"UNII": 12757,
"PUBCHEM.COMPOUND": 1927,
"CHEMBL.COMPOUND": 20
},
"object_id_prefixes": {
"MONDO": 80629,
"UMLS": 2
}
},
{
"subject_category": [
"biolink:Protein"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Disease"
],
"count": 32086,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 32086
},
"qualifiers": {},
"attributes": {
"id": 32086,
"category": 32086,
"knowledge_level": 32086,
"agent_type": 32086,
"has_supporting_studies": 32086,
"original_subject": 32086,
"original_object": 32086
},
"subject_id_prefixes": {
"UMLS": 32086
},
"object_id_prefixes": {
"MONDO": 32085,
"UMLS": 1
}
},
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Disease"
],
"count": 11393,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 11393
},
"qualifiers": {
"qualified_predicate": 11393
},
"attributes": {
"id": 11393,
"category": 11393,
"knowledge_level": 11393,
"agent_type": 11393,
"has_supporting_studies": 11393,
"original_subject": 11393,
"original_object": 11393
},
"subject_id_prefixes": {
"NCBIGene": 11393
},
"object_id_prefixes": {
"MONDO": 11393
}
},
{
"subject_category": [
"biolink:ChemicalMixture"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 7837,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 7837
},
"qualifiers": {
"object_aspect_qualifier": 7837,
"object_direction_qualifier": 7837,
"qualified_predicate": 7837
},
"attributes": {
"id": 7837,
"category": 7837,
"knowledge_level": 7837,
"agent_type": 7837,
"has_supporting_studies": 7837,
"original_subject": 7837,
"original_object": 7837
},
"subject_id_prefixes": {
"CHEBI": 7837
},
"object_id_prefixes": {
"NCBIGene": 7837
}
},
{
"subject_category": [
"biolink:Drug",
"biolink:SmallMolecule"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 5745,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 5745
},
"qualifiers": {},
"attributes": {
"id": 5745,
"category": 5745,
"knowledge_level": 5745,
"agent_type": 5745,
"has_supporting_studies": 5745,
"original_subject": 5745,
"original_object": 5745
},
"subject_id_prefixes": {
"CHEBI": 5556,
"UNII": 137,
"PUBCHEM.COMPOUND": 52
},
"object_id_prefixes": {
"HP": 5745
}
},
{
"subject_category": [
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 59477,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 59477
},
"qualifiers": {
"object_aspect_qualifier": 59477,
"object_direction_qualifier": 59477,
"qualified_predicate": 59477
},
"attributes": {
"id": 59477,
"category": 59477,
"knowledge_level": 59477,
"agent_type": 59477,
"has_supporting_studies": 59477,
"original_subject": 59477,
"original_object": 59477
},
"subject_id_prefixes": {
"UMLS": 57207,
"UniProtKB": 2270
},
"object_id_prefixes": {
"NCBIGene": 59477
}
},
{
"subject_category": [
"biolink:Drug",
"biolink:SmallMolecule"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Disease"
],
"count": 71277,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 71277
},
"qualifiers": {},
"attributes": {
"id": 71277,
"category": 71277,
"knowledge_level": 71277,
"agent_type": 71277,
"has_supporting_studies": 71277,
"original_subject": 71277,
"original_object": 71277
},
"subject_id_prefixes": {
"CHEBI": 69137,
"UNII": 1472,
"PUBCHEM.COMPOUND": 668
},
"object_id_prefixes": {
"MONDO": 71253,
"UMLS": 24
}
},
{
"subject_category": [
"biolink:Drug"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Disease"
],
"count": 10201,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 10201
},
"qualifiers": {},
"attributes": {
"id": 10201,
"category": 10201,
"knowledge_level": 10201,
"agent_type": 10201,
"has_supporting_studies": 10201,
"original_subject": 10201,
"original_object": 10201
},
"subject_id_prefixes": {
"DRUGBANK": 5321,
"CHEBI": 2572,
"UNII": 1832,
"PUBCHEM.COMPOUND": 268,
"MESH": 159,
"UMLS": 25,
"CHEMBL.COMPOUND": 24
},
"object_id_prefixes": {
"MONDO": 10198,
"UMLS": 3
}
},
{
"subject_category": [
"biolink:ChemicalEntity"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Disease"
],
"count": 26444,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 26444
},
"qualifiers": {},
"attributes": {
"id": 26444,
"category": 26444,
"knowledge_level": 26444,
"agent_type": 26444,
"has_supporting_studies": 26444,
"original_subject": 26444,
"original_object": 26444
},
"subject_id_prefixes": {
"CHEBI": 13526,
"DRUGBANK": 10121,
"UNII": 2797
},
"object_id_prefixes": {
"MONDO": 26444
}
},
{
"subject_category": [
"biolink:Drug"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Disease"
],
"count": 21208,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 21208
},
"qualifiers": {},
"attributes": {
"id": 21208,
"category": 21208,
"knowledge_level": 21208,
"agent_type": 21208,
"has_supporting_studies": 21208,
"original_subject": 21208,
"original_object": 21208
},
"subject_id_prefixes": {
"DRUGBANK": 7328,
"CHEBI": 7325,
"UNII": 5050,
"MESH": 700,
"PUBCHEM.COMPOUND": 573,
"UMLS": 133,
"CHEMBL.COMPOUND": 99
},
"object_id_prefixes": {
"MONDO": 21208
}
},
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 7234,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 7234
},
"qualifiers": {},
"attributes": {
"id": 7234,
"category": 7234,
"knowledge_level": 7234,
"agent_type": 7234,
"has_supporting_studies": 7234,
"original_subject": 7234,
"original_object": 7234
},
"subject_id_prefixes": {
"NCBIGene": 7234
},
"object_id_prefixes": {
"HP": 7234
}
},
{
"subject_category": [
"biolink:Drug"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 34800,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 34800
},
"qualifiers": {
"object_aspect_qualifier": 34800,
"object_direction_qualifier": 34800,
"qualified_predicate": 34800
},
"attributes": {
"id": 34800,
"category": 34800,
"knowledge_level": 34800,
"agent_type": 34800,
"has_supporting_studies": 34800,
"original_subject": 34800,
"original_object": 34800
},
"subject_id_prefixes": {
"DRUGBANK": 18341,
"CHEBI": 10653,
"UNII": 3787,
"PUBCHEM.COMPOUND": 1329,
"MESH": 453,
"UMLS": 199,
"CHEMBL.COMPOUND": 38
},
"object_id_prefixes": {
"NCBIGene": 34800
}
},
{
"subject_category": [
"biolink:Protein"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Disease"
],
"count": 17334,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 17334
},
"qualifiers": {},
"attributes": {
"id": 17334,
"category": 17334,
"knowledge_level": 17334,
"agent_type": 17334,
"has_supporting_studies": 17334,
"original_subject": 17334,
"original_object": 17334
},
"subject_id_prefixes": {
"UMLS": 13467,
"UniProtKB": 3867
},
"object_id_prefixes": {
"MONDO": 17332,
"UMLS": 2
}
},
{
"subject_category": [
"biolink:SmallMolecule"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Protein"
],
"count": 1344,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1344
},
"qualifiers": {
"object_aspect_qualifier": 1344,
"object_direction_qualifier": 1344,
"qualified_predicate": 1344
},
"attributes": {
"id": 1344,
"category": 1344,
"knowledge_level": 1344,
"agent_type": 1344,
"has_supporting_studies": 1344,
"original_subject": 1344,
"original_object": 1344
},
"subject_id_prefixes": {
"CHEBI": 1214,
"UNII": 103,
"PUBCHEM.COMPOUND": 27
},
"object_id_prefixes": {
"UniProtKB": 1344
}
},
{
"subject_category": [
"biolink:MolecularMixture",
"biolink:SmallMolecule"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Disease"
],
"count": 2057,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 2057
},
"qualifiers": {},
"attributes": {
"id": 2057,
"category": 2057,
"knowledge_level": 2057,
"agent_type": 2057,
"has_supporting_studies": 2057,
"original_subject": 2057,
"original_object": 2057
},
"subject_id_prefixes": {
"CHEBI": 1932,
"UNII": 125
},
"object_id_prefixes": {
"MONDO": 2057
}
},
{
"subject_category": [
"biolink:MolecularMixture"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 3715,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 3715
},
"qualifiers": {
"object_aspect_qualifier": 3715,
"object_direction_qualifier": 3715,
"qualified_predicate": 3715
},
"attributes": {
"id": 3715,
"category": 3715,
"knowledge_level": 3715,
"agent_type": 3715,
"has_supporting_studies": 3715,
"original_subject": 3715,
"original_object": 3715
},
"subject_id_prefixes": {
"CHEBI": 2967,
"UNII": 576,
"PUBCHEM.COMPOUND": 172
},
"object_id_prefixes": {
"NCBIGene": 3715
}
},
{
"subject_category": [
"biolink:Protein"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 1041,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1041
},
"qualifiers": {},
"attributes": {
"id": 1041,
"category": 1041,
"knowledge_level": 1041,
"agent_type": 1041,
"has_supporting_studies": 1041,
"original_subject": 1041,
"original_object": 1041
},
"subject_id_prefixes": {
"UMLS": 972,
"UniProtKB": 69
},
"object_id_prefixes": {
"HP": 1041
}
},
{
"subject_category": [
"biolink:Drug",
"biolink:SmallMolecule"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 7393,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 7393
},
"qualifiers": {},
"attributes": {
"id": 7393,
"category": 7393,
"knowledge_level": 7393,
"agent_type": 7393,
"has_supporting_studies": 7393,
"original_subject": 7393,
"original_object": 7393
},
"subject_id_prefixes": {
"CHEBI": 7153,
"UNII": 176,
"PUBCHEM.COMPOUND": 64
},
"object_id_prefixes": {
"HP": 7393
}
},
{
"subject_category": [
"biolink:SmallMolecule"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 2042,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 2042
},
"qualifiers": {},
"attributes": {
"id": 2042,
"category": 2042,
"knowledge_level": 2042,
"agent_type": 2042,
"has_supporting_studies": 2042,
"original_subject": 2042,
"original_object": 2042
},
"subject_id_prefixes": {
"CHEBI": 1783,
"UNII": 228,
"PUBCHEM.COMPOUND": 27,
"CHEMBL.COMPOUND": 4
},
"object_id_prefixes": {
"HP": 2042
}
},
{
"subject_category": [
"biolink:MolecularMixture",
"biolink:SmallMolecule"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 7198,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 7198
},
"qualifiers": {
"object_aspect_qualifier": 7198,
"object_direction_qualifier": 7198,
"qualified_predicate": 7198
},
"attributes": {
"id": 7198,
"category": 7198,
"knowledge_level": 7198,
"agent_type": 7198,
"has_supporting_studies": 7198,
"original_subject": 7198,
"original_object": 7198
},
"subject_id_prefixes": {
"CHEBI": 7176,
"UNII": 22
},
"object_id_prefixes": {
"NCBIGene": 7198
}
},
{
"subject_category": [
"biolink:MolecularMixture"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Disease"
],
"count": 3035,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 3035
},
"qualifiers": {},
"attributes": {
"id": 3035,
"category": 3035,
"knowledge_level": 3035,
"agent_type": 3035,
"has_supporting_studies": 3035,
"original_subject": 3035,
"original_object": 3035
},
"subject_id_prefixes": {
"CHEBI": 2064,
"UNII": 638,
"PUBCHEM.COMPOUND": 333
},
"object_id_prefixes": {
"MONDO": 3035
}
},
{
"subject_category": [
"biolink:ChemicalEntity"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 630,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 630
},
"qualifiers": {},
"attributes": {
"id": 630,
"category": 630,
"knowledge_level": 630,
"agent_type": 630,
"has_supporting_studies": 630,
"original_subject": 630,
"original_object": 630
},
"subject_id_prefixes": {
"CHEBI": 323,
"DRUGBANK": 249,
"UNII": 58
},
"object_id_prefixes": {
"HP": 630
}
},
{
"subject_category": [
"biolink:ChemicalMixture"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Disease"
],
"count": 959,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 959
},
"qualifiers": {},
"attributes": {
"id": 959,
"category": 959,
"knowledge_level": 959,
"agent_type": 959,
"has_supporting_studies": 959,
"original_subject": 959,
"original_object": 959
},
"subject_id_prefixes": {
"CHEBI": 959
},
"object_id_prefixes": {
"MONDO": 959
}
},
{
"subject_category": [
"biolink:Disease"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:ChemicalEntity"
],
"count": 7,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 7
},
"qualifiers": {},
"attributes": {
"id": 7,
"category": 7,
"knowledge_level": 7,
"agent_type": 7,
"has_supporting_studies": 7,
"original_subject": 7,
"original_object": 7
},
"subject_id_prefixes": {
"MONDO": 7
},
"object_id_prefixes": {
"CHEBI": 6,
"DRUGBANK": 1
}
},
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 522,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 522
},
"qualifiers": {
"qualified_predicate": 522
},
"attributes": {
"id": 522,
"category": 522,
"knowledge_level": 522,
"agent_type": 522,
"has_supporting_studies": 522,
"original_subject": 522,
"original_object": 522
},
"subject_id_prefixes": {
"NCBIGene": 522
},
"object_id_prefixes": {
"HP": 522
}
},
{
"subject_category": [
"biolink:ChemicalMixture"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Disease"
],
"count": 1786,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1786
},
"qualifiers": {},
"attributes": {
"id": 1786,
"category": 1786,
"knowledge_level": 1786,
"agent_type": 1786,
"has_supporting_studies": 1786,
"original_subject": 1786,
"original_object": 1786
},
"subject_id_prefixes": {
"CHEBI": 1786
},
"object_id_prefixes": {
"MONDO": 1786
}
},
{
"subject_category": [
"biolink:MolecularMixture",
"biolink:SmallMolecule"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Disease"
],
"count": 1058,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1058
},
"qualifiers": {},
"attributes": {
"id": 1058,
"category": 1058,
"knowledge_level": 1058,
"agent_type": 1058,
"has_supporting_studies": 1058,
"original_subject": 1058,
"original_object": 1058
},
"subject_id_prefixes": {
"CHEBI": 1038,
"UNII": 20
},
"object_id_prefixes": {
"MONDO": 1058
}
},
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Protein"
],
"count": 1945,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1945
},
"qualifiers": {
"object_aspect_qualifier": 1945,
"object_direction_qualifier": 1945,
"qualified_predicate": 1945
},
"attributes": {
"id": 1945,
"category": 1945,
"knowledge_level": 1945,
"agent_type": 1945,
"has_supporting_studies": 1945,
"original_subject": 1945,
"original_object": 1945
},
"subject_id_prefixes": {
"NCBIGene": 1945
},
"object_id_prefixes": {
"UniProtKB": 1910,
"UMLS": 35
}
},
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Disease"
],
"count": 268,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 268
},
"qualifiers": {},
"attributes": {
"id": 268,
"category": 268,
"knowledge_level": 268,
"agent_type": 268,
"has_supporting_studies": 268,
"original_subject": 268,
"original_object": 268
},
"subject_id_prefixes": {
"NCBIGene": 268
},
"object_id_prefixes": {
"MONDO": 268
}
},
{
"subject_category": [
"biolink:Disease"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Drug",
"biolink:SmallMolecule"
],
"count": 123,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 123
},
"qualifiers": {},
"attributes": {
"id": 123,
"category": 123,
"knowledge_level": 123,
"agent_type": 123,
"has_supporting_studies": 123,
"original_subject": 123,
"original_object": 123
},
"subject_id_prefixes": {
"MONDO": 123
},
"object_id_prefixes": {
"CHEBI": 121,
"PUBCHEM.COMPOUND": 1,
"UNII": 1
}
},
{
"subject_category": [
"biolink:Protein"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 702,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 702
},
"qualifiers": {},
"attributes": {
"id": 702,
"category": 702,
"knowledge_level": 702,
"agent_type": 702,
"has_supporting_studies": 702,
"original_subject": 702,
"original_object": 702
},
"subject_id_prefixes": {
"UMLS": 702
},
"object_id_prefixes": {
"HP": 702
}
},
{
"subject_category": [
"biolink:SmallMolecule"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 1473,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1473
},
"qualifiers": {},
"attributes": {
"id": 1473,
"category": 1473,
"knowledge_level": 1473,
"agent_type": 1473,
"has_supporting_studies": 1473,
"original_subject": 1473,
"original_object": 1473
},
"subject_id_prefixes": {
"CHEBI": 1253,
"UNII": 193,
"PUBCHEM.COMPOUND": 24,
"CHEMBL.COMPOUND": 3
},
"object_id_prefixes": {
"HP": 1473
}
},
{
"subject_category": [
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Protein"
],
"count": 540,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 540
},
"qualifiers": {
"object_aspect_qualifier": 540,
"object_direction_qualifier": 540,
"qualified_predicate": 540
},
"attributes": {
"id": 540,
"category": 540,
"knowledge_level": 540,
"agent_type": 540,
"has_supporting_studies": 540,
"original_subject": 540,
"original_object": 540
},
"subject_id_prefixes": {
"UMLS": 464,
"UniProtKB": 76
},
"object_id_prefixes": {
"UniProtKB": 540
}
},
{
"subject_category": [
"biolink:MolecularMixture"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 89,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 89
},
"qualifiers": {},
"attributes": {
"id": 89,
"category": 89,
"knowledge_level": 89,
"agent_type": 89,
"has_supporting_studies": 89,
"original_subject": 89,
"original_object": 89
},
"subject_id_prefixes": {
"CHEBI": 69,
"PUBCHEM.COMPOUND": 12,
"UNII": 8
},
"object_id_prefixes": {
"HP": 89
}
},
{
"subject_category": [
"biolink:MolecularMixture"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Disease"
],
"count": 1122,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1122
},
"qualifiers": {},
"attributes": {
"id": 1122,
"category": 1122,
"knowledge_level": 1122,
"agent_type": 1122,
"has_supporting_studies": 1122,
"original_subject": 1122,
"original_object": 1122
},
"subject_id_prefixes": {
"CHEBI": 889,
"UNII": 129,
"PUBCHEM.COMPOUND": 104
},
"object_id_prefixes": {
"MONDO": 1121,
"UMLS": 1
}
},
{
"subject_category": [
"biolink:ChemicalEntity"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 628,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 628
},
"qualifiers": {},
"attributes": {
"id": 628,
"category": 628,
"knowledge_level": 628,
"agent_type": 628,
"has_supporting_studies": 628,
"original_subject": 628,
"original_object": 628
},
"subject_id_prefixes": {
"CHEBI": 384,
"DRUGBANK": 195,
"UNII": 49
},
"object_id_prefixes": {
"HP": 628
}
},
{
"subject_category": [
"biolink:ComplexMolecularMixture"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Disease"
],
"count": 39,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 39
},
"qualifiers": {},
"attributes": {
"id": 39,
"category": 39,
"knowledge_level": 39,
"agent_type": 39,
"has_supporting_studies": 39,
"original_subject": 39,
"original_object": 39
},
"subject_id_prefixes": {
"DRUGBANK": 39
},
"object_id_prefixes": {
"MONDO": 39
}
},
{
"subject_category": [
"biolink:MolecularMixture"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 65,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 65
},
"qualifiers": {},
"attributes": {
"id": 65,
"category": 65,
"knowledge_level": 65,
"agent_type": 65,
"has_supporting_studies": 65,
"original_subject": 65,
"original_object": 65
},
"subject_id_prefixes": {
"CHEBI": 45,
"UNII": 13,
"PUBCHEM.COMPOUND": 7
},
"object_id_prefixes": {
"HP": 65
}
},
{
"subject_category": [
"biolink:Drug"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 764,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 764
},
"qualifiers": {},
"attributes": {
"id": 764,
"category": 764,
"knowledge_level": 764,
"agent_type": 764,
"has_supporting_studies": 764,
"original_subject": 764,
"original_object": 764
},
"subject_id_prefixes": {
"DRUGBANK": 278,
"CHEBI": 266,
"UNII": 172,
"PUBCHEM.COMPOUND": 25,
"MESH": 16,
"CHEMBL.COMPOUND": 5,
"UMLS": 2
},
"object_id_prefixes": {
"HP": 764
}
},
{
"subject_category": [
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Disease"
],
"count": 93,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 93
},
"qualifiers": {
"qualified_predicate": 93
},
"attributes": {
"id": 93,
"category": 93,
"knowledge_level": 93,
"agent_type": 93,
"has_supporting_studies": 93,
"original_subject": 93,
"original_object": 93
},
"subject_id_prefixes": {
"UniProtKB": 93
},
"object_id_prefixes": {
"MONDO": 93
}
},
{
"subject_category": [
"biolink:Disease"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Drug"
],
"count": 18,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 18
},
"qualifiers": {},
"attributes": {
"id": 18,
"category": 18,
"knowledge_level": 18,
"agent_type": 18,
"has_supporting_studies": 18,
"original_subject": 18,
"original_object": 18
},
"subject_id_prefixes": {
"MONDO": 18
},
"object_id_prefixes": {
"CHEBI": 15,
"UNII": 2,
"PUBCHEM.COMPOUND": 1
}
},
{
"subject_category": [
"biolink:Drug"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 531,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 531
},
"qualifiers": {},
"attributes": {
"id": 531,
"category": 531,
"knowledge_level": 531,
"agent_type": 531,
"has_supporting_studies": 531,
"original_subject": 531,
"original_object": 531
},
"subject_id_prefixes": {
"CHEBI": 193,
"DRUGBANK": 154,
"UNII": 135,
"MESH": 21,
"PUBCHEM.COMPOUND": 17,
"UMLS": 6,
"CHEMBL.COMPOUND": 5
},
"object_id_prefixes": {
"HP": 531
}
},
{
"subject_category": [
"biolink:MolecularMixture"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Protein"
],
"count": 36,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 36
},
"qualifiers": {
"object_aspect_qualifier": 36,
"object_direction_qualifier": 36,
"qualified_predicate": 36
},
"attributes": {
"id": 36,
"category": 36,
"knowledge_level": 36,
"agent_type": 36,
"has_supporting_studies": 36,
"original_subject": 36,
"original_object": 36
},
"subject_id_prefixes": {
"CHEBI": 31,
"UNII": 4,
"PUBCHEM.COMPOUND": 1
},
"object_id_prefixes": {
"UniProtKB": 36
}
},
{
"subject_category": [
"biolink:Drug"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Protein"
],
"count": 252,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 252
},
"qualifiers": {
"object_aspect_qualifier": 252,
"object_direction_qualifier": 252,
"qualified_predicate": 252
},
"attributes": {
"id": 252,
"category": 252,
"knowledge_level": 252,
"agent_type": 252,
"has_supporting_studies": 252,
"original_subject": 252,
"original_object": 252
},
"subject_id_prefixes": {
"DRUGBANK": 107,
"CHEBI": 88,
"UNII": 42,
"PUBCHEM.COMPOUND": 11,
"MESH": 4
},
"object_id_prefixes": {
"UniProtKB": 252
}
},
{
"subject_category": [
"biolink:ChemicalEntity"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Protein"
],
"count": 426,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 426
},
"qualifiers": {
"object_aspect_qualifier": 426,
"object_direction_qualifier": 426,
"qualified_predicate": 426
},
"attributes": {
"id": 426,
"category": 426,
"knowledge_level": 426,
"agent_type": 426,
"has_supporting_studies": 426,
"original_subject": 426,
"original_object": 426
},
"subject_id_prefixes": {
"CHEBI": 269,
"DRUGBANK": 128,
"UNII": 29
},
"object_id_prefixes": {
"UniProtKB": 426
}
},
{
"subject_category": [
"biolink:ChemicalMixture"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 60,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 60
},
"qualifiers": {},
"attributes": {
"id": 60,
"category": 60,
"knowledge_level": 60,
"agent_type": 60,
"has_supporting_studies": 60,
"original_subject": 60,
"original_object": 60
},
"subject_id_prefixes": {
"CHEBI": 60
},
"object_id_prefixes": {
"HP": 60
}
},
{
"subject_category": [
"biolink:ChemicalMixture"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 37,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 37
},
"qualifiers": {},
"attributes": {
"id": 37,
"category": 37,
"knowledge_level": 37,
"agent_type": 37,
"has_supporting_studies": 37,
"original_subject": 37,
"original_object": 37
},
"subject_id_prefixes": {
"CHEBI": 37
},
"object_id_prefixes": {
"HP": 37
}
},
{
"subject_category": [
"biolink:MolecularMixture",
"biolink:SmallMolecule"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 42,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 42
},
"qualifiers": {},
"attributes": {
"id": 42,
"category": 42,
"knowledge_level": 42,
"agent_type": 42,
"has_supporting_studies": 42,
"original_subject": 42,
"original_object": 42
},
"subject_id_prefixes": {
"CHEBI": 41,
"UNII": 1
},
"object_id_prefixes": {
"HP": 42
}
},
{
"subject_category": [
"biolink:Disease"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 2,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 2
},
"qualifiers": {},
"attributes": {
"id": 2,
"category": 2,
"knowledge_level": 2,
"agent_type": 2,
"has_supporting_studies": 2,
"original_subject": 2,
"original_object": 2
},
"subject_id_prefixes": {
"MONDO": 2
},
"object_id_prefixes": {
"NCBIGene": 2
}
},
{
"subject_category": [
"biolink:ChemicalMixture"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Protein"
],
"count": 70,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 70
},
"qualifiers": {
"object_aspect_qualifier": 70,
"object_direction_qualifier": 70,
"qualified_predicate": 70
},
"attributes": {
"id": 70,
"category": 70,
"knowledge_level": 70,
"agent_type": 70,
"has_supporting_studies": 70,
"original_subject": 70,
"original_object": 70
},
"subject_id_prefixes": {
"CHEBI": 70
},
"object_id_prefixes": {
"UniProtKB": 70
}
},
{
"subject_category": [
"biolink:MolecularMixture",
"biolink:SmallMolecule"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Protein"
],
"count": 43,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 43
},
"qualifiers": {
"object_aspect_qualifier": 43,
"object_direction_qualifier": 43,
"qualified_predicate": 43
},
"attributes": {
"id": 43,
"category": 43,
"knowledge_level": 43,
"agent_type": 43,
"has_supporting_studies": 43,
"original_subject": 43,
"original_object": 43
},
"subject_id_prefixes": {
"CHEBI": 43
},
"object_id_prefixes": {
"UniProtKB": 43
}
},
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Drug",
"biolink:SmallMolecule"
],
"count": 86,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 86
},
"qualifiers": {
"object_aspect_qualifier": 86,
"object_direction_qualifier": 86,
"qualified_predicate": 86
},
"attributes": {
"id": 86,
"category": 86,
"knowledge_level": 86,
"agent_type": 86,
"has_supporting_studies": 86,
"original_subject": 86,
"original_object": 86
},
"subject_id_prefixes": {
"NCBIGene": 86
},
"object_id_prefixes": {
"CHEBI": 86
}
},
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:SmallMolecule"
],
"count": 30,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 30
},
"qualifiers": {
"object_aspect_qualifier": 30,
"object_direction_qualifier": 30,
"qualified_predicate": 30
},
"attributes": {
"id": 30,
"category": 30,
"knowledge_level": 30,
"agent_type": 30,
"has_supporting_studies": 30,
"original_subject": 30,
"original_object": 30
},
"subject_id_prefixes": {
"NCBIGene": 30
},
"object_id_prefixes": {
"CHEBI": 30
}
},
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:ChemicalEntity"
],
"count": 8,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 8
},
"qualifiers": {
"object_aspect_qualifier": 8,
"object_direction_qualifier": 8,
"qualified_predicate": 8
},
"attributes": {
"id": 8,
"category": 8,
"knowledge_level": 8,
"agent_type": 8,
"has_supporting_studies": 8,
"original_subject": 8,
"original_object": 8
},
"subject_id_prefixes": {
"NCBIGene": 8
},
"object_id_prefixes": {
"CHEBI": 7,
"UNII": 1
}
},
{
"subject_category": [
"biolink:Disease"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:SmallMolecule"
],
"count": 47,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 47
},
"qualifiers": {},
"attributes": {
"id": 47,
"category": 47,
"knowledge_level": 47,
"agent_type": 47,
"has_supporting_studies": 47,
"original_subject": 47,
"original_object": 47
},
"subject_id_prefixes": {
"MONDO": 47
},
"object_id_prefixes": {
"CHEBI": 42,
"UNII": 4,
"PUBCHEM.COMPOUND": 1
}
},
{
"subject_category": [
"biolink:ComplexMolecularMixture"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Disease"
],
"count": 19,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 19
},
"qualifiers": {},
"attributes": {
"id": 19,
"category": 19,
"knowledge_level": 19,
"agent_type": 19,
"has_supporting_studies": 19,
"original_subject": 19,
"original_object": 19
},
"subject_id_prefixes": {
"DRUGBANK": 19
},
"object_id_prefixes": {
"MONDO": 19
}
},
{
"subject_category": [
"biolink:MolecularMixture",
"biolink:SmallMolecule"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 74,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 74
},
"qualifiers": {},
"attributes": {
"id": 74,
"category": 74,
"knowledge_level": 74,
"agent_type": 74,
"has_supporting_studies": 74,
"original_subject": 74,
"original_object": 74
},
"subject_id_prefixes": {
"CHEBI": 73,
"UNII": 1
},
"object_id_prefixes": {
"HP": 74
}
},
{
"subject_category": [
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:SmallMolecule"
],
"count": 1,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1
},
"qualifiers": {
"object_aspect_qualifier": 1,
"object_direction_qualifier": 1,
"qualified_predicate": 1
},
"attributes": {
"id": 1,
"category": 1,
"knowledge_level": 1,
"agent_type": 1,
"has_supporting_studies": 1,
"original_subject": 1,
"original_object": 1
},
"subject_id_prefixes": {
"UniProtKB": 1
},
"object_id_prefixes": {
"CHEBI": 1
}
},
{
"subject_category": [
"biolink:ComplexMolecularMixture"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 18,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 18
},
"qualifiers": {
"object_aspect_qualifier": 18,
"object_direction_qualifier": 18,
"qualified_predicate": 18
},
"attributes": {
"id": 18,
"category": 18,
"knowledge_level": 18,
"agent_type": 18,
"has_supporting_studies": 18,
"original_subject": 18,
"original_object": 18
},
"subject_id_prefixes": {
"DRUGBANK": 18
},
"object_id_prefixes": {
"NCBIGene": 18
}
},
{
"subject_category": [
"biolink:Disease"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Drug",
"biolink:SmallMolecule"
],
"count": 6,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 6
},
"qualifiers": {},
"attributes": {
"id": 6,
"category": 6,
"knowledge_level": 6,
"agent_type": 6,
"has_supporting_studies": 6,
"original_subject": 6,
"original_object": 6
},
"subject_id_prefixes": {
"MONDO": 6
},
"object_id_prefixes": {
"CHEBI": 6
}
},
{
"subject_category": [
"biolink:Disease"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Gene",
"biolink:Protein"
],
"count": 17,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 17
},
"qualifiers": {},
"attributes": {
"id": 17,
"category": 17,
"knowledge_level": 17,
"agent_type": 17,
"has_supporting_studies": 17,
"original_subject": 17,
"original_object": 17
},
"subject_id_prefixes": {
"MONDO": 17
},
"object_id_prefixes": {
"NCBIGene": 17
}
},
{
"subject_category": [
"biolink:Disease"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Protein"
],
"count": 8,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 8
},
"qualifiers": {},
"attributes": {
"id": 8,
"category": 8,
"knowledge_level": 8,
"agent_type": 8,
"has_supporting_studies": 8,
"original_subject": 8,
"original_object": 8
},
"subject_id_prefixes": {
"MONDO": 8
},
"object_id_prefixes": {
"UMLS": 8
}
},
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:ChemicalMixture"
],
"count": 4,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 4
},
"qualifiers": {
"object_aspect_qualifier": 4,
"object_direction_qualifier": 4,
"qualified_predicate": 4
},
"attributes": {
"id": 4,
"category": 4,
"knowledge_level": 4,
"agent_type": 4,
"has_supporting_studies": 4,
"original_subject": 4,
"original_object": 4
},
"subject_id_prefixes": {
"NCBIGene": 4
},
"object_id_prefixes": {
"CHEBI": 4
}
},
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 6,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 6
},
"qualifiers": {},
"attributes": {
"id": 6,
"category": 6,
"knowledge_level": 6,
"agent_type": 6,
"has_supporting_studies": 6,
"original_subject": 6,
"original_object": 6
},
"subject_id_prefixes": {
"NCBIGene": 6
},
"object_id_prefixes": {
"HP": 6
}
},
{
"subject_category": [
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 5,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 5
},
"qualifiers": {
"qualified_predicate": 5
},
"attributes": {
"id": 5,
"category": 5,
"knowledge_level": 5,
"agent_type": 5,
"has_supporting_studies": 5,
"original_subject": 5,
"original_object": 5
},
"subject_id_prefixes": {
"UniProtKB": 5
},
"object_id_prefixes": {
"HP": 5
}
},
{
"subject_category": [
"biolink:PhenotypicFeature"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:Drug"
],
"count": 1,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1
},
"qualifiers": {},
"attributes": {
"id": 1,
"category": 1,
"knowledge_level": 1,
"agent_type": 1,
"has_supporting_studies": 1,
"original_subject": 1,
"original_object": 1
},
"subject_id_prefixes": {
"HP": 1
},
"object_id_prefixes": {
"CHEBI": 1
}
},
{
"subject_category": [
"biolink:ComplexMolecularMixture"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:PhenotypicFeature"
],
"count": 2,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 2
},
"qualifiers": {},
"attributes": {
"id": 2,
"category": 2,
"knowledge_level": 2,
"agent_type": 2,
"has_supporting_studies": 2,
"original_subject": 2,
"original_object": 2
},
"subject_id_prefixes": {
"DRUGBANK": 2
},
"object_id_prefixes": {
"HP": 2
}
},
{
"subject_category": [
"biolink:Gene",
"biolink:Protein"
],
"predicate": "biolink:affects",
"object_category": [
"biolink:Drug"
],
"count": 1,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1
},
"qualifiers": {
"object_aspect_qualifier": 1,
"object_direction_qualifier": 1,
"qualified_predicate": 1
},
"attributes": {
"id": 1,
"category": 1,
"knowledge_level": 1,
"agent_type": 1,
"has_supporting_studies": 1,
"original_subject": 1,
"original_object": 1
},
"subject_id_prefixes": {
"NCBIGene": 1
},
"object_id_prefixes": {
"CHEBI": 1
}
},
{
"subject_category": [
"biolink:Disease"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:ChemicalMixture"
],
"count": 1,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1
},
"qualifiers": {},
"attributes": {
"id": 1,
"category": 1,
"knowledge_level": 1,
"agent_type": 1,
"has_supporting_studies": 1,
"original_subject": 1,
"original_object": 1
},
"subject_id_prefixes": {
"MONDO": 1
},
"object_id_prefixes": {
"CHEBI": 1
}
},
{
"subject_category": [
"biolink:PhenotypicFeature"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:Drug",
"biolink:SmallMolecule"
],
"count": 1,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1
},
"qualifiers": {},
"attributes": {
"id": 1,
"category": 1,
"knowledge_level": 1,
"agent_type": 1,
"has_supporting_studies": 1,
"original_subject": 1,
"original_object": 1
},
"subject_id_prefixes": {
"HP": 1
},
"object_id_prefixes": {
"CHEBI": 1
}
},
{
"subject_category": [
"biolink:Disease"
],
"predicate": "biolink:contributes_to",
"object_category": [
"biolink:SmallMolecule"
],
"count": 2,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 2
},
"qualifiers": {},
"attributes": {
"id": 2,
"category": 2,
"knowledge_level": 2,
"agent_type": 2,
"has_supporting_studies": 2,
"original_subject": 2,
"original_object": 2
},
"subject_id_prefixes": {
"MONDO": 2
},
"object_id_prefixes": {
"CHEBI": 2
}
},
{
"subject_category": [
"biolink:Disease"
],
"predicate": "biolink:treats",
"object_category": [
"biolink:MolecularMixture",
"biolink:SmallMolecule"
],
"count": 1,
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1
},
"qualifiers": {},
"attributes": {
"id": 1,
"category": 1,
"knowledge_level": 1,
"agent_type": 1,
"has_supporting_studies": 1,
"original_subject": 1,
"original_object": 1
},
"subject_id_prefixes": {
"MONDO": 1
},
"object_id_prefixes": {
"CHEBI": 1
}
}
],
"edges_summary": {
"total_count": 1862000,
"predicates": {
"biolink:affects": 959291,
"biolink:contributes_to": 544700,
"biolink:treats": 358009
},
"primary_knowledge_sources": {
"infores:text-mining-provider-cooccurrence": 1862000
},
"predicates_by_knowledge_source": {
"infores:text-mining-provider-cooccurrence": {
"biolink:affects": 959291,
"biolink:contributes_to": 544700,
"biolink:treats": 358009
}
},
"qualifiers": {
"qualified_predicate": 959291,
"object_aspect_qualifier": 947278,
"object_direction_qualifier": 947278
},
"attributes": {
"id": 1862000,
"category": 1862000,
"knowledge_level": 1862000,
"agent_type": 1862000,
"has_supporting_studies": 1862000,
"original_subject": 1862000,
"original_object": 1862000
}
}
}
}